Prof. Dr. Volker M. Koch, Switzerland

Homepage Search Contact

Biomedical Instrumentation
Fall 2008

 

Messages

  • 01-December-2008: Here are the slides from the info event: Koch, Ferguson.
  • 22-October-2008: Sign up for the Swiss IEEE EMBS newsletter if you are interested in biomedical engineering events.

 

Overview and Goals

This is a compulsory course for all students enrolled in the biomedical engineering master's degree program. Most students will take it during their first semester.

The main goal of this course is to introduce the basics of biomedical instrumentation:

  • Physiology: Where are biological signals generated?
  • Signals: What are they like? 
  • Sensors: How can we record them? 
  • Signal processing and applications: What can we do with them?

Many lectures start with an application (e.g., a cardiac pacemaker) or a practical biomedical problem (e.g., the analysis of blood for medical diagnosis). We then examine what can be measured and how it can be acquired, processed, analyzed, and used. 

 

Dates, Topics, Files

The documents, animations, videos etc. on this page are copyright protected. They can be used for teaching purposes only. Please do not distribute them. Note: To access the following documents, a password is required.

01) CW 38
Topics: exemplary application (cardiac pacemakers), course overview and information
Files: presentation, problem set
Links: animation (function of the heart), animation (ECG generation), pacemaker slide show, New York Times article (first patient with fully implanted cardiac pacemaker), New York Times article (hacking of a pacemaker)

02) CW 39
Topics: EE fundamentals, LabVIEW introduction, BFH-TI lab tour (biomed lab, optics lab, robotics lab)
Files: presentation, problem set

03) CW 40
Topics: origin of biosignals (resting and action potentials, nerve conduction), electromyography, LabVIEW
Files: presentation, problem set, LabVIEW Introduction, CircuitMaker file (first pacemaker)

04) CW 41
Topics: medical imaging (x-rays, CT, MRI, fMRI), LabVIEW (ECG measurement demonstration)
Files: presentation, problem set, patent, paper

05) CW 42
Topics: biosignal acquisition (electrodes)
Files: presentation, problem set, NYT article

06) CW 43
Topics: biosignal acquisition (electrodes, analog processing with op amps)
Files: presentation, problem set, patent

07) CW 44
Topics: biosignal acquisition (analog processing with op amps, A/D conversion), biosignal processing and analysis (time and frequency domain, some methods and applications)
Files: presentation, problem set, DFT Applet

08) CW 45
Topics: image processing and analysis
Files: presentation, problem set

09) CW 46
Topics: problem set (review, opportunity to ask questions, and exam preparation)
Files: problem set

10) CW 47
Topics: circulatory system (blood pressure)   
Files: presentation, problem set, Blutdruckmesser-Test

11) CW 48
Topics: circulatory system (blood flow), ethics (lobotomy)
Files: presentation, problem set, article, IEEE Code of Ethics 

12) CW 49
Topics: respiratory system (lung volume), body fat, ethics (brain surgery)
Files: presentation, problem set, patent   

13) CW 50
Topics: flow measurement, hydrocephalus, bioelectrical impedance analysis
Files: presentation, problem set, paper (thermal flow sensor for hydrocephalus), manual (body composition analyzer), patent (body fat measurement)

14) CW 51
Topics: electronic implants (internal defibrillators, cochlear implants, retinal implants)
Files: presentation, problem set

 

Location and Time

  • Bern, Stauffacherstr. 78, basement (015 seminar room 1)
  • 09:25–12:40

 

Exam

  • Written exam, closed book, no aids.
  • January 29, 2009; 9:00 - 11:00 
  • Location: Bern, Stauffacherstr. 78, basement (015 seminar room 1) - the usual room
  • Relevant for the exam are
    – Exercises
    - Lectures and slides
  • All exam problems will be in English. I will provide help if you do not understand a question because of the language. Your answers should also be in English. This is the preferred language. If you cannot write something in English, German words are OK. No penalty is given if you write everything in German.

 

Course Book

  • Medical Instrumentation: Application and Design
    John G. Webster
    3rd edition, 1998

 

Further Literature

  • Introduction to Biomedical Engineering
    John Enderle, Susan Blanchard, Joseph Bronzino
    2nd edition, 2005
  • Schaum's Outline of Electric Circuits
    Amazon (about 14 €)
    I recommend to review chapters 1-5 if you do not have a background in electrical engineering.

 

Downloads

  • CircuitMaker (password protected)
    1) Download it
    2) Unzip it
    3) Move directory "My electronics" into the directory "C:\"

 

Links

 

02/2009